Create Hotspot Modules and calculate module scores given a HS object with local correlations already calculated

Source: R/methods-Module.R

Create Hotspot Modules and calculate module scores given a HS object with local correlations already calculated

hsCalculateModuleScores(
  hs,
  min_gene_threshold = 20,
  clustering_fdr = 0.5,
  plot = F
)

Arguments

hs

the Hotspot object, must have ran compute_local_correlations already

min_gene_threshold

min genes per module

clustering_fdr

p value for clustering genes

Value

the modified hs object